Published
Oct 21, 2024
Updated
Oct 21, 2024

Unlocking PDF Data with LLMs: A How-To Guide

Developing Retrieval Augmented Generation (RAG) based LLM Systems from PDFs: An Experience Report
By
Ayman Asad Khan|Md Toufique Hasan|Kai Kristian Kemell|Jussi Rasku|Pekka Abrahamsson

Summary

Large language models (LLMs) are impressive at generating human-like text, but they can sometimes provide outdated or inaccurate information because their training data is static. This is especially problematic in fields with rapidly changing knowledge, like healthcare or finance. Retrieval Augmented Generation (RAG) offers a powerful solution. RAG systems connect LLMs to external data sources like PDFs, databases, or websites, grounding their responses in up-to-date, accurate information. This post provides a practical guide to building your own RAG system using PDFs, offering both proprietary and open-source approaches. Traditional LLMs like GPT, BERT, or T5 are limited by their knowledge cut-off date. They excel at general tasks but struggle in specialized areas requiring up-to-the-minute data. RAG changes this dynamic by incorporating real-time retrieval from external sources. This works by first taking a user's query and transforming it into a vector embedding, a numerical representation capturing its semantic meaning. This vector is then compared to embeddings of chunks of text from your document database (like a collection of PDFs). The most similar chunks are retrieved and fed to the LLM along with the original query, enabling the model to give a response based on current and relevant data. PDFs are particularly valuable for RAG due to their widespread use in sharing important information. They contain rich, structured data often found in research, legal, technical, and financial documents. While PDFs are a goldmine of information, they also pose challenges. Their complex layouts, diverse formatting, and the presence of non-textual elements like charts and images can make extracting clean text difficult. This requires sophisticated extraction tools and strategies, as text accuracy is crucial for high-performing RAG systems. This guide provides a comprehensive step-by-step approach to build a RAG system: data preparation, embedding creation, retrieval, and response generation. It emphasizes two primary approaches: OpenAI's Assistant API and the open-source Llama model. OpenAI provides an easy-to-use, cloud-based solution ideal for quick prototyping and deployment. Llama offers more control and customization, allowing developers to fine-tune the model to specific domains and deploy it in diverse environments. The OpenAI path involves setting up the environment, configuring the API, preparing your PDFs, creating a vector store, designing an assistant with specific instructions, and finally initiating a conversation. The Llama approach leverages tools like Ollama, FAISS for indexing, and Langchain to create a powerful local RAG system. Preliminary evaluations show that the RAG approach significantly improves response accuracy and reliability. Participants in a workshop who used this guide were able to successfully implement RAG systems and reported a deeper understanding of the process. However, challenges remain, especially concerning the handling of diverse PDF formats and the computational resources required for large-scale deployments. Future research focuses on enhancing adaptability, cross-lingual capabilities, and integration with knowledge graphs to make RAG systems even more powerful. As RAG systems evolve, they promise to revolutionize how we access and utilize information, opening up exciting new possibilities across numerous fields.
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Question & Answers

How does the RAG system process PDFs to enable accurate information retrieval?
The RAG system processes PDFs through a multi-step technical workflow. First, it extracts text from PDFs using specialized tools that handle complex layouts and formatting. Then, it converts both the extracted text chunks and user queries into vector embeddings - numerical representations that capture semantic meaning. The system uses these vectors to perform similarity matching, retrieving the most relevant PDF segments for the LLM to use in generating responses. For example, in a medical research setting, when a doctor asks about recent treatment protocols, the system can pull specific information from the latest PDF studies rather than relying on the LLM's static training data.
What are the main benefits of using RAG systems for businesses?
RAG systems offer businesses a powerful way to leverage their internal documents and stay current with information. They combine the natural language capabilities of AI with real-time access to company documents, ensuring responses are both accurate and up-to-date. Key benefits include improved decision-making through access to current data, reduced risk of outdated information, and more efficient document searching. For instance, a financial firm could use RAG to quickly access the latest market reports, compliance documents, and client information, making their advisory services more accurate and responsive.
How is AI changing the way we access information in everyday life?
AI is revolutionizing information access by making it more intuitive and personalized. Instead of manually searching through documents or websites, AI systems can now understand natural language questions and provide relevant, contextualized answers. This technology is particularly valuable in education, research, and professional settings where quick access to accurate information is crucial. For example, students can ask complex questions about their study materials and receive targeted responses, while professionals can quickly find specific information in large document collections without extensive manual searching.

PromptLayer Features

  1. Workflow Management
  2. The paper's RAG implementation requires complex multi-step orchestration from PDF processing to embedding creation and response generation, aligning with PromptLayer's workflow management capabilities
Implementation Details
Create versioned templates for PDF extraction, embedding generation, and LLM querying steps; implement workflow tracking for each stage; establish reusable components for different document types
Key Benefits
• Standardized RAG pipeline execution across different document types • Version control for each processing step and prompt • Reproducible workflows for different PDF formats and LLM models
Potential Improvements
• Add specialized PDF preprocessing templates • Implement automatic workflow optimization based on performance metrics • Create adaptive pipelines for different document complexities
Business Value
Efficiency Gains
Reduces setup time for new RAG implementations by 60-70% through reusable templates
Cost Savings
Minimizes development costs through standardized workflows and reduced error rates
Quality Improvement
Ensures consistent processing quality across different document types and formats
  1. Testing & Evaluation
  2. The paper emphasizes the importance of evaluating RAG system accuracy and reliability, which aligns with PromptLayer's testing and evaluation capabilities
Implementation Details
Configure batch tests for different PDF types; set up A/B testing between different embedding approaches; implement regression testing for response accuracy
Key Benefits
• Systematic evaluation of RAG system performance • Comparison of different embedding and retrieval strategies • Early detection of accuracy degradation
Potential Improvements
• Develop specialized metrics for PDF extraction quality • Create automated testing pipelines for new document types • Implement cross-validation frameworks for response accuracy
Business Value
Efficiency Gains
Reduces manual evaluation time by 80% through automated testing
Cost Savings
Prevents costly errors through early detection of accuracy issues
Quality Improvement
Ensures consistent response quality across different document types and queries

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